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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THYM rs12239423 chr1:79021234 A/G GAGE12J chrX:49178536-49185863:+ 0.71 7.55 2.64E-11 Box Plot
THYM rs12338546 chr9:78895112 G/A DARS chr2:136664247-136743670:- 1.25 7.27 1.0E-10 Box Plot
THYM rs12340033 chr9:1002183 C/G HNRNPCL1 chr1:12907261-12908578:- 0.46 7.58 2.29E-11 Box Plot
THYM rs12343006 chr9:1002280 A/G HNRNPCL1 chr1:12907261-12908578:- 0.46 7.59 2.22E-11 Box Plot
THYM rs12549941 chr8:285030 G/C RXFP2 chr13:32313679-32377525:+ 0.9 10.11 9.84E-17 Box Plot
THYM rs12567769 chr1:10727773 A/G GPR149 chr3:154055461-154147504:- 0.77 7.78 8.69E-12 Box Plot
THYM rs12658510 chr5:176605273 G/A LOC388955 chr2:63849182-63850159:- -0.84 -12.03 8.59E-21 Box Plot
THYM rs12659737 chr5:176742506 T/C LOC388955 chr2:63849182-63850159:- 0.67 9.31 4.88E-15 Box Plot
THYM rs12660023 chr5:176700885 G/A LOC388955 chr2:63849182-63850159:- 0.56 7.84 6.53E-12 Box Plot
THYM rs13157667 chr5:176613877 C/T LOC388955 chr2:63849182-63850159:- -0.84 -12.19 3.85E-21 Box Plot
THYM rs13159114 chr5:176661808 T/C LOC388955 chr2:63849182-63850159:- 0.83 11.26 3.51E-19 Box Plot
THYM rs13166688 chr5:176583966 T/C LOC388955 chr2:63849182-63850159:- -0.69 -9.96 2.03E-16 Box Plot
THYM rs13167431 chr5:176621075 G/C LOC388955 chr2:63849182-63850159:- -0.84 -12.19 3.85E-21 Box Plot
THYM rs13172121 chr5:176612747 T/A LOC388955 chr2:63849182-63850159:- -0.84 -11.91 1.51E-20 Box Plot
THYM rs13174760 chr5:176634443 C/A LOC388955 chr2:63849182-63850159:- -0.81 -11.56 8.18E-20 Box Plot